Plan
for a
BIOLOGY LABORATORY
CLEARINGHOUSE
TABLE OF CONTENTS
IDEA
HISTORY OF IDEA
NEED
USERS
PLAN DETAILS
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Content
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Roles
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Administration
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Processes
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Manuscript Routing
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Interface
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Security
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Updating
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Funding
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Long-term Plans
IDEA
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Much more than an online lab manual:
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Searchable database of articles (files) from which user
downloads those of interest free of charge
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Content can be modified locally by user
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User may deliver to students online and/or hard copy
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Author retains ownership (avoids legal issues)
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Multimedia (video clips, tutorials, images)
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Can and will be revised frequently
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Has online forum for obtaining ideas for improvement
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Unlike other online lab resources to date:
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"Wet", not 'dry' or 'virtual' labs
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Broader than area-specific sites such as cell biology
(http://www.gac.edu/cgi-bin/user/~cellab/phpl?index-1.html)
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Broader than organism-specific sites such as Research
Link 2000 (http://www.researchlink.ferris.edu/)
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Makes available previously unpublished instruction (e.g.
nervous system investigations by Charley Drews, investigations used at
Cornell by Jon Glase, many others) and unpublished methods (e.g. how to
germinate pollen grains).
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Brings all materials together in one searchable website.
HISTORY OF IDEA
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Local online manual published for several years
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Local need for new ideas, no help from published manuals,
help from colleagues at other institutions and ABLE publications
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Discussions with Peregrine Publishers
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ITUE at UD
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PBL Clearinghouse at UD (based on Experts & Speakers
database)
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Sabbatical leave (fall 2000) available for project
NEED
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Messages in list-serves (e.g. plant-ed) asking for activities
and methods; answers not archived in searchable form.
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Colleagues indicating they have laboratory methods/activities
they would like share (personal communications).
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Published lab manuals have one or more of the following
drawbacks
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Out of date and not frequently revised
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Not inquiry-based
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Not able to be adapted to local materials and equipment
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Limited number of activities
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Expensive relative to the extent actually used
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National societies promoting laboratory instruction
(e.g. ABLE, NABT) tap into only a small percentage of instructional material,
much of which not suitable for workshop format (e.g. animal development
taking several weeks).
USERS
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Targeted to 4-year college/university, 2-year college,
and high schools.
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User must register; this minimizes unauthorized e.g.
by students.
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User presented with examples of content.
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User given search parameters.
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Search result is an HTML document with associated graphic
and video files, suitable for immediate viewing and downloading/running
on local server.
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User also provided with downloadable .pdf files to retain
formating, make available to any platform, and incorporate into hardcopy
lab manual.
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Typically user will modify downloads as needed for local
conditions (e.g. laboratory equipment and organisms) and incorporate into
educational instruction already being used.
PLAN DETAILS
Based on Problem-Based Learning Clearinghouse
(PBLC) being developed
at the University of Delaware (http://crawdads.mis.udel.edu/~maria/pbl/)
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Ranges
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High school to four-year college (emphasis on latter)
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Pre-planned to open-ended (emphasis on latter)
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Methods-only to complete investigations
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All levels of technology
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Any location (lab, field)
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Any organism (microbes to humans)
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Any level in biological hierarchy (molecular to ecological)
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Qualitative and quantitative (emphasis on latter)
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Database Organization
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Authors will determine from lists of allowed indexing
terms
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Indexing terms are to be determined; examples
are:
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Student level (HS, 2C, 4C)
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Location (indoor, outdoor)
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Organism (microbe, protist, fungus, plant, animal)
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Data type (qualitative, quantitative)
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Area (molecular, cellular, organismic, ecological, genetic,
evolutionary)
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Amount of technology employed (minimal, extensive)
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Type of communication (method, complete lab experience)
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Type of lab (pre-planned, open-ended)
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Possible Components
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Text file for students
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Text file for instructors (materials, teaching tips)
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Image files
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Video files
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Tutorials (Java applets)
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Roles
The following is from the PBL Clearinghouse.
It will be used with some modification.
PBL Clearinghouse Roles
Users (Subscribers)
Users must apply for access to the Clearinghouse. Access is limited
to non-student academic faculty. They may search, browse, and view problems
and articles. They may not submit entries themselves, unless they apply
to become an author.
Authors
Authors must first apply and be accepted as a Clearinghouse author
before they can submit a problem or article. Authors can submit, view,
and update problems in a revision cycle.
Editor-in-chief
In the case where there are multiple editors for a problem, one will
act as editor-in-chief with final approval authority. Initially there is
only one editor-in-chief. The Super User assigns editors-in-chief.
Editors
Editors are assigned by special invitation from the PBL Clearinghouse
administrators. Initially, all editors will be UD affiliates. Editors receive
submissions and determine routing assignments. One or more reviewer will
be assigned for each problem or article. Editors can review, but most often
will assign reviewers. They are the communication link with the author.
They review the reviewer's report and determine approval. Editors can also
view applications that come in for new authors and reviewers.
Reviewer
Reviewers must first apply and be accepted as a Clearinghouse reviewer.
The editor will select reviewer(s) for a problem based on the reviewer's
discipline of expertise. Reviewers review the problems and write a report.
They do not communicate with the authors, they only report back to the
editor level.
User Approval Group
This group includes specified individuals who can approve new users
and change the privileges of all others..
Super User
There will most likely be only one or two Super Users. This role can
review applications for access and for author/reviewer status, can change
anyone's privileges.
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Administration
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Steering Committee: makes decisions about overall
design of Clearinghouse, its website, and its operation
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Administrator: Attends to maintenance of website;
assigns manuscripts to Editors
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Processes
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Apply to use the clearinghouse (prospective User)
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Apply to be an author or reviewer (must be User first)
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Search for article of interest (User)
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Manage my Clearinghouse activities (User, Author, Reviewer)
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Determine who will handle manuscript (Manager)
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Review manuscripts (Reviewers)
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Acceptance of manuscript (Editor)
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Posting to the Clearinghouse (Manager)
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Renew/replace administrators (Steering Committee)
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Revise articles (Authors)
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Remove articles (Super User)
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Manuscript Routing
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Manuscript (files) submitted as MS Word document and
HTML document with asssociated image and applet files.
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Manager assigns Editor.
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Editor assigns Reviewers as needed.
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Manuscripts reviewed; interface tracks them.
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Editor decides acceptance/rejection.
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Accepted manuscripts (files) sent to Manager.
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Manager converts MS Word text document to .pdf format.
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Manager uploads files to server.
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Interface: Java applets and Oracle 8.1.5
database written by UD
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Security: Users register with enough data
to reveal if they are legitimate instructors
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Updating: Periodic calls to authors
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Funding:
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Seek grant for concept development (e.g. NSF/DUE/CCLI
June 2001)
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Seek corporate funding for partial support of site maintenance
(e.g. Carolina Biological Supply)
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Long-term Plans
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Attract national organization (e.g. ABLE or NABT) to
take over site.